Cluster: HRGMv2_0783_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0783_61 | HRGMv2_0783_61_5 | 4799 | 5692 | - | 3.A.1.1.20 |
| TC | HRGMv2_0783_61 | HRGMv2_0783_61_6 | 5707 | 6687 | - | 3.A.1.1.20 |
| TF | HRGMv2_0783_61 | HRGMv2_0783_61_7 | 6963 | 7715 | + | HTH_DeoR |
| NULL(UNKNOWN) | HRGMv2_0783_61 | HRGMv2_0783_61_8 | 7675 | 8256 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0783_61 | HRGMv2_0783_61_9 | 8253 | 9683 | - | GH20 |
| CAZyme | HRGMv2_0783_61 | HRGMv2_0783_61_10 | 9866 | 11851 | - | GH78 |
Gene ID: HRGMv2_0783_61_5
Type: TC
Location: 4799 - 5692 (-)
Type: TC
Location: 4799 - 5692 (-)
Gene ID: HRGMv2_0783_61_6
Type: TC
Location: 5707 - 6687 (-)
Type: TC
Location: 5707 - 6687 (-)
Gene ID: HRGMv2_0783_61_7
Type: TF
Location: 6963 - 7715 (+)
Type: TF
Location: 6963 - 7715 (+)
Gene ID: HRGMv2_0783_61_8
Type:
Location: 7675 - 8256 (+)
Type:
Location: 7675 - 8256 (+)
Gene ID: HRGMv2_0783_61_9
Type: CAZyme
Location: 8253 - 9683 (-)
Type: CAZyme
Location: 8253 - 9683 (-)
Gene ID: HRGMv2_0783_61_10
Type: CAZyme
Location: 9866 - 11851 (-)
Type: CAZyme
Location: 9866 - 11851 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp900557285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.