Cluster: HRGMv2_0783_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0783
- CGC Family ID: CGCFAM_03033
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0783_21 | HRGMv2_0783_21_15 | 17536 | 19362 | + | 9.B.18.2.1 |
| NULL(UNKNOWN) | HRGMv2_0783_21 | HRGMv2_0783_21_16 | 19407 | 20780 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0783_21 | HRGMv2_0783_21_17 | 21058 | 22221 | + | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| TC | HRGMv2_0783_21 | HRGMv2_0783_21_18 | 22260 | 23063 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_0783_21 | HRGMv2_0783_21_19 | 23111 | 24370 | + | GT4 |
Gene ID: HRGMv2_0783_21_15
Type: TC
Location: 17536 - 19362 (+)
Type: TC
Location: 17536 - 19362 (+)
Gene ID: HRGMv2_0783_21_16
Type:
Location: 19407 - 20780 (+)
Type:
Location: 19407 - 20780 (+)
Gene ID: HRGMv2_0783_21_17
Type: pfam
Location: 21058 - 22221 (+)
Type: pfam
Location: 21058 - 22221 (+)
Gene ID: HRGMv2_0783_21_18
Type: TC
Location: 22260 - 23063 (+)
Type: TC
Location: 22260 - 23063 (+)
Gene ID: HRGMv2_0783_21_19
Type: CAZyme
Location: 23111 - 24370 (+)
Type: CAZyme
Location: 23111 - 24370 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp900557285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.