Cluster: HRGMv2_0780_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0780
- CGC Family ID: CGCFAM_03048
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0780_11 | HRGMv2_0780_11_2 | 1254 | 3245 | + | GH3 |
| CAZyme | HRGMv2_0780_11 | HRGMv2_0780_11_3 | 3266 | 5830 | + | GH31 |
| TC | HRGMv2_0780_11 | HRGMv2_0780_11_4 | 6132 | 6968 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_0780_11 | HRGMv2_0780_11_5 | 6988 | 8115 | + | GT4 |
Gene ID: HRGMv2_0780_11_2
Type: CAZyme
Location: 1254 - 3245 (+)
Type: CAZyme
Location: 1254 - 3245 (+)
Gene ID: HRGMv2_0780_11_3
Type: CAZyme
Location: 3266 - 5830 (+)
Type: CAZyme
Location: 3266 - 5830 (+)
Gene ID: HRGMv2_0780_11_4
Type: TC
Location: 6132 - 6968 (+)
Type: TC
Location: 6132 - 6968 (+)
Gene ID: HRGMv2_0780_11_5
Type: CAZyme
Location: 6988 - 8115 (+)
Type: CAZyme
Location: 6988 - 8115 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas caecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.