Cluster: HRGMv2_0780_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0780
- CGC Family ID: CGCFAM_01137
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0780_10 | HRGMv2_0780_10_23 | 27672 | 29393 | - | GH2 |
| TC | HRGMv2_0780_10 | HRGMv2_0780_10_24 | 29446 | 30420 | - | 3.A.1.1.11 |
| TC | HRGMv2_0780_10 | HRGMv2_0780_10_25 | 30431 | 31372 | - | 3.A.1.1.26 |
| STP | HRGMv2_0780_10 | HRGMv2_0780_10_26 | 31396 | 32883 | - | SBP_bac_1 |
| TF | HRGMv2_0780_10 | HRGMv2_0780_10_27 | 32911 | 33882 | - | HTH_5 |
| CAZyme | HRGMv2_0780_10 | HRGMv2_0780_10_28 | 33894 | 36509 | - | GH43_32 |
Gene ID: HRGMv2_0780_10_23
Type: CAZyme
Location: 27672 - 29393 (-)
Type: CAZyme
Location: 27672 - 29393 (-)
Gene ID: HRGMv2_0780_10_24
Type: TC
Location: 29446 - 30420 (-)
Type: TC
Location: 29446 - 30420 (-)
Gene ID: HRGMv2_0780_10_25
Type: TC
Location: 30431 - 31372 (-)
Type: TC
Location: 30431 - 31372 (-)
Gene ID: HRGMv2_0780_10_26
Type: STP
Location: 31396 - 32883 (-)
Type: STP
Location: 31396 - 32883 (-)
Gene ID: HRGMv2_0780_10_27
Type: TF
Location: 32911 - 33882 (-)
Type: TF
Location: 32911 - 33882 (-)
Gene ID: HRGMv2_0780_10_28
Type: CAZyme
Location: 33894 - 36509 (-)
Type: CAZyme
Location: 33894 - 36509 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas caecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.