Cluster: HRGMv2_0780_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0780
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0780_8 | HRGMv2_0780_8_16 | 16743 | 17759 | + | GH43_26 |
| STP | HRGMv2_0780_8 | HRGMv2_0780_8_17 | 17871 | 18509 | - | Pribosyltran |
| TC | HRGMv2_0780_8 | HRGMv2_0780_8_18 | 18493 | 20019 | - | 2.A.40.1.2 |
| pfam | HRGMv2_0780_8 | HRGMv2_0780_8_19 | 20428 | 20775 | - | DUF1667 |
| STP | HRGMv2_0780_8 | HRGMv2_0780_8_20 | 20777 | 22012 | - | Pyr_redox_2 |
| CAZyme | HRGMv2_0780_8 | HRGMv2_0780_8_21 | 22033 | 24324 | - | CBM67 | GH78 |
Gene ID: HRGMv2_0780_8_16
Type: CAZyme
Location: 16743 - 17759 (+)
Type: CAZyme
Location: 16743 - 17759 (+)
Gene ID: HRGMv2_0780_8_17
Type: STP
Location: 17871 - 18509 (-)
Type: STP
Location: 17871 - 18509 (-)
Gene ID: HRGMv2_0780_8_18
Type: TC
Location: 18493 - 20019 (-)
Type: TC
Location: 18493 - 20019 (-)
Gene ID: HRGMv2_0780_8_19
Type: pfam
Location: 20428 - 20775 (-)
Type: pfam
Location: 20428 - 20775 (-)
Gene ID: HRGMv2_0780_8_20
Type: STP
Location: 20777 - 22012 (-)
Type: STP
Location: 20777 - 22012 (-)
Gene ID: HRGMv2_0780_8_21
Type: CAZyme
Location: 22033 - 24324 (-)
Type: CAZyme
Location: 22033 - 24324 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas caecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.