Cluster: HRGMv2_0780_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0780
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0780_8 | HRGMv2_0780_8_1 | 2 | 3025 | - | GH146 |
| TF | HRGMv2_0780_8 | HRGMv2_0780_8_2 | 3164 | 3964 | + | HTH_AraC |
| pfam | HRGMv2_0780_8 | HRGMv2_0780_8_3 | 4010 | 4207 | - | DUF1858 |
| TC | HRGMv2_0780_8 | HRGMv2_0780_8_4 | 4315 | 4770 | - | 9.A.11.1.1 |
Gene ID: HRGMv2_0780_8_1
Type: CAZyme
Location: 2 - 3025 (-)
Type: CAZyme
Location: 2 - 3025 (-)
Gene ID: HRGMv2_0780_8_2
Type: TF
Location: 3164 - 3964 (+)
Type: TF
Location: 3164 - 3964 (+)
Gene ID: HRGMv2_0780_8_3
Type: pfam
Location: 4010 - 4207 (-)
Type: pfam
Location: 4010 - 4207 (-)
Gene ID: HRGMv2_0780_8_4
Type: TC
Location: 4315 - 4770 (-)
Type: TC
Location: 4315 - 4770 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas caecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.