Cluster: HRGMv2_0780_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0780
- CGC Family ID: CGCFAM_01030
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0780_3 | HRGMv2_0780_3_34 | 31301 | 33232 | + | 3.A.3.6.10 |
| sulfatase | HRGMv2_0780_3 | HRGMv2_0780_3_35 | 33680 | 36220 | + | S1_2 |
| pfam | HRGMv2_0780_3 | HRGMv2_0780_3_36 | 36207 | 36788 | + | CoaE |
| CAZyme | HRGMv2_0780_3 | HRGMv2_0780_3_37 | 36831 | 37358 | + | GH23 |
Gene ID: HRGMv2_0780_3_34
Type: TC
Location: 31301 - 33232 (+)
Type: TC
Location: 31301 - 33232 (+)
Gene ID: HRGMv2_0780_3_35
Type: sulfatase
Location: 33680 - 36220 (+)
Type: sulfatase
Location: 33680 - 36220 (+)
Gene ID: HRGMv2_0780_3_36
Type: pfam
Location: 36207 - 36788 (+)
Type: pfam
Location: 36207 - 36788 (+)
Gene ID: HRGMv2_0780_3_37
Type: CAZyme
Location: 36831 - 37358 (+)
Type: CAZyme
Location: 36831 - 37358 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas caecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.