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Cluster: HRGMv2_0780_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0780_35 HRGMv2_0780_35_6 4551 6545 - 3.A.11.1.3
pfam HRGMv2_0780_35 HRGMv2_0780_35_7 6611 7249 + Hydrolase | HAD | Hydrolase_like | HAD_2
CAZyme HRGMv2_0780_35 HRGMv2_0780_35_8 7303 9264 - GH31_4
pfam HRGMv2_0780_35 HRGMv2_0780_35_9 9408 9815 - ATP-synt_DE | ATP-synt_DE_N
TC HRGMv2_0780_35 HRGMv2_0780_35_10 9818 11218 - 3.A.2.1.5
TC HRGMv2_0780_35 HRGMv2_0780_35_11 11215 12114 - 3.A.2.1.7
TC HRGMv2_0780_35 HRGMv2_0780_35_12 12111 13853 - 3.A.2.1.5
Gene ID: HRGMv2_0780_35_6
Type: TC
Location: 4551 - 6545 (-)
Gene ID: HRGMv2_0780_35_7
Type: pfam
Location: 6611 - 7249 (+)
Gene ID: HRGMv2_0780_35_8
Type: CAZyme
Location: 7303 - 9264 (-)
Gene ID: HRGMv2_0780_35_9
Type: pfam
Location: 9408 - 9815 (-)
Gene ID: HRGMv2_0780_35_10
Type: TC
Location: 9818 - 11218 (-)
Gene ID: HRGMv2_0780_35_11
Type: TC
Location: 11215 - 12114 (-)
Gene ID: HRGMv2_0780_35_12
Type: TC
Location: 12111 - 13853 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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