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Cluster: HRGMv2_0780_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0780_28 HRGMv2_0780_28_4 3825 5816 - GH3
CAZyme HRGMv2_0780_28 HRGMv2_0780_28_5 5818 7770 - GH42
CAZyme HRGMv2_0780_28 HRGMv2_0780_28_6 7773 10304 - GH31
NULL(UNKNOWN) HRGMv2_0780_28 HRGMv2_0780_28_7 10341 11318 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0780_28 HRGMv2_0780_28_8 11400 15704 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0780_28 HRGMv2_0780_28_9 15722 17716 - GH43_33
TC HRGMv2_0780_28 HRGMv2_0780_28_10 17809 18753 - 3.A.1.1.48
TC HRGMv2_0780_28 HRGMv2_0780_28_11 18755 19774 - 3.A.1.1.20
Gene ID: HRGMv2_0780_28_4
Type: CAZyme
Location: 3825 - 5816 (-)
Gene ID: HRGMv2_0780_28_5
Type: CAZyme
Location: 5818 - 7770 (-)
Gene ID: HRGMv2_0780_28_6
Type: CAZyme
Location: 7773 - 10304 (-)
Gene ID: HRGMv2_0780_28_7
Type:
Location: 10341 - 11318 (-)
Gene ID: HRGMv2_0780_28_8
Type:
Location: 11400 - 15704 (-)
Gene ID: HRGMv2_0780_28_9
Type: CAZyme
Location: 15722 - 17716 (-)
Gene ID: HRGMv2_0780_28_10
Type: TC
Location: 17809 - 18753 (-)
Gene ID: HRGMv2_0780_28_11
Type: TC
Location: 18755 - 19774 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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