Cluster: HRGMv2_0780_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0780
- CGC Family ID: CGCFAM_08504
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0780_18 | HRGMv2_0780_18_3 | 1314 | 2819 | - | GH43_4 |
| CAZyme | HRGMv2_0780_18 | HRGMv2_0780_18_4 | 2891 | 4417 | - | GH43_4 |
| TC | HRGMv2_0780_18 | HRGMv2_0780_18_5 | 4551 | 5621 | - | 3.A.1.1.18 |
| TC | HRGMv2_0780_18 | HRGMv2_0780_18_6 | 5633 | 6871 | - | 3.A.1.1.34 |
Gene ID: HRGMv2_0780_18_3
Type: CAZyme
Location: 1314 - 2819 (-)
Type: CAZyme
Location: 1314 - 2819 (-)
Gene ID: HRGMv2_0780_18_4
Type: CAZyme
Location: 2891 - 4417 (-)
Type: CAZyme
Location: 2891 - 4417 (-)
Gene ID: HRGMv2_0780_18_5
Type: TC
Location: 4551 - 5621 (-)
Type: TC
Location: 4551 - 5621 (-)
Gene ID: HRGMv2_0780_18_6
Type: TC
Location: 5633 - 6871 (-)
Type: TC
Location: 5633 - 6871 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas caecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.