Cluster: HRGMv2_0780_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0780
- CGC Family ID: CGCFAM_05527
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0780_16 | HRGMv2_0780_16_2 | 1302 | 3110 | - | 1.A.33.1.4 |
| pfam | HRGMv2_0780_16 | HRGMv2_0780_16_3 | 3181 | 3792 | - | GrpE |
| sulfatase | HRGMv2_0780_16 | HRGMv2_0780_16_4 | 3905 | 4945 | - | S1_22 |
| CAZyme | HRGMv2_0780_16 | HRGMv2_0780_16_5 | 5047 | 5730 | + | CE4 |
| pfam | HRGMv2_0780_16 | HRGMv2_0780_16_6 | 5684 | 6205 | - | Cation_ATPase_C |
| TC | HRGMv2_0780_16 | HRGMv2_0780_16_7 | 6144 | 8300 | - | 3.A.3.2.21 |
Gene ID: HRGMv2_0780_16_2
Type: TC
Location: 1302 - 3110 (-)
Type: TC
Location: 1302 - 3110 (-)
Gene ID: HRGMv2_0780_16_3
Type: pfam
Location: 3181 - 3792 (-)
Type: pfam
Location: 3181 - 3792 (-)
Gene ID: HRGMv2_0780_16_4
Type: sulfatase
Location: 3905 - 4945 (-)
Type: sulfatase
Location: 3905 - 4945 (-)
Gene ID: HRGMv2_0780_16_5
Type: CAZyme
Location: 5047 - 5730 (+)
Type: CAZyme
Location: 5047 - 5730 (+)
Gene ID: HRGMv2_0780_16_6
Type: pfam
Location: 5684 - 6205 (-)
Type: pfam
Location: 5684 - 6205 (-)
Gene ID: HRGMv2_0780_16_7
Type: TC
Location: 6144 - 8300 (-)
Type: TC
Location: 6144 - 8300 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas caecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.