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Cluster: HRGMv2_0780_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0780_1 HRGMv2_0780_1_38 39097 40074 + 3.A.1.1.20
TC HRGMv2_0780_1 HRGMv2_0780_1_39 40085 40981 + 3.A.1.1.34
pfam HRGMv2_0780_1 HRGMv2_0780_1_40 41006 43504 + CBM9_1 | CarboxypepD_reg
CAZyme HRGMv2_0780_1 HRGMv2_0780_1_41 43515 46022 + GH43
CAZyme HRGMv2_0780_1 HRGMv2_0780_1_42 46053 48656 + GH43_32
CAZyme HRGMv2_0780_1 HRGMv2_0780_1_43 48719 51223 + GH43_32
CAZyme HRGMv2_0780_1 HRGMv2_0780_1_44 51247 53049 + GH2
CAZyme HRGMv2_0780_1 HRGMv2_0780_1_45 53046 54464 + AA4
Gene ID: HRGMv2_0780_1_38
Type: TC
Location: 39097 - 40074 (+)
Gene ID: HRGMv2_0780_1_39
Type: TC
Location: 40085 - 40981 (+)
Gene ID: HRGMv2_0780_1_40
Type: pfam
Location: 41006 - 43504 (+)
Gene ID: HRGMv2_0780_1_41
Type: CAZyme
Location: 43515 - 46022 (+)
Gene ID: HRGMv2_0780_1_42
Type: CAZyme
Location: 46053 - 48656 (+)
Gene ID: HRGMv2_0780_1_43
Type: CAZyme
Location: 48719 - 51223 (+)
Gene ID: HRGMv2_0780_1_44
Type: CAZyme
Location: 51247 - 53049 (+)
Gene ID: HRGMv2_0780_1_45
Type: CAZyme
Location: 53046 - 54464 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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