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Cluster: HRGMv2_0779_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0779_15 HRGMv2_0779_15_7 4636 5445 + 3.A.1.3.23
TC HRGMv2_0779_15 HRGMv2_0779_15_8 5521 6165 + 3.A.1.3.14
TC HRGMv2_0779_15 HRGMv2_0779_15_9 6169 6957 + 3.A.1.3.10
TF HRGMv2_0779_15 HRGMv2_0779_15_10 7039 7611 - HTH_AraC
pfam HRGMv2_0779_15 HRGMv2_0779_15_11 7913 8410 + CrtO
CAZyme HRGMv2_0779_15 HRGMv2_0779_15_12 8407 9576 + GT28
NULL(UNKNOWN) HRGMv2_0779_15 HRGMv2_0779_15_13 9839 10393 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0779_15 HRGMv2_0779_15_14 10408 12120 - 3.A.1.134.4
TC HRGMv2_0779_15 HRGMv2_0779_15_15 12113 12874 - 3.A.1.134.4
Gene ID: HRGMv2_0779_15_7
Type: TC
Location: 4636 - 5445 (+)
Gene ID: HRGMv2_0779_15_8
Type: TC
Location: 5521 - 6165 (+)
Gene ID: HRGMv2_0779_15_9
Type: TC
Location: 6169 - 6957 (+)
Gene ID: HRGMv2_0779_15_10
Type: TF
Location: 7039 - 7611 (-)
Gene ID: HRGMv2_0779_15_11
Type: pfam
Location: 7913 - 8410 (+)
Gene ID: HRGMv2_0779_15_12
Type: CAZyme
Location: 8407 - 9576 (+)
Gene ID: HRGMv2_0779_15_13
Type:
Location: 9839 - 10393 (-)
Gene ID: HRGMv2_0779_15_14
Type: TC
Location: 10408 - 12120 (-)
Gene ID: HRGMv2_0779_15_15
Type: TC
Location: 12113 - 12874 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
CAG-138
→
Genus
CAG-1024
→
Species
CAG-1024 sp000432015

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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