Cluster: HRGMv2_0779_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0779
- CGC Family ID: CGCFAM_04018
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0779_6 | HRGMv2_0779_6_63 | 74874 | 76604 | - | GH13_2 |
| TC | HRGMv2_0779_6 | HRGMv2_0779_6_64 | 76608 | 77456 | - | 3.A.1.1.45 |
| TC | HRGMv2_0779_6 | HRGMv2_0779_6_65 | 77446 | 78333 | - | 3.A.1.1.42 |
| STP | HRGMv2_0779_6 | HRGMv2_0779_6_66 | 78420 | 79748 | - | SBP_bac_1 |
| TC | HRGMv2_0779_6 | HRGMv2_0779_6_67 | 79913 | 81712 | + | 8.A.59.2.1 |
| TF | HRGMv2_0779_6 | HRGMv2_0779_6_68 | 81714 | 83204 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0779_6 | HRGMv2_0779_6_69 | 83208 | 84863 | + | GH13_31 |
| NULL(UNKNOWN) | HRGMv2_0779_6 | HRGMv2_0779_6_70 | 86234 | 86860 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0779_6 | HRGMv2_0779_6_71 | 86854 | 87306 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0779_6 | HRGMv2_0779_6_72 | 87410 | 88123 | + | 3.A.1.147.6 |
| TC | HRGMv2_0779_6 | HRGMv2_0779_6_73 | 88117 | 89715 | + | 3.A.1.147.4 |
Gene ID: HRGMv2_0779_6_63
Type: CAZyme
Location: 74874 - 76604 (-)
Type: CAZyme
Location: 74874 - 76604 (-)
Gene ID: HRGMv2_0779_6_64
Type: TC
Location: 76608 - 77456 (-)
Type: TC
Location: 76608 - 77456 (-)
Gene ID: HRGMv2_0779_6_65
Type: TC
Location: 77446 - 78333 (-)
Type: TC
Location: 77446 - 78333 (-)
Gene ID: HRGMv2_0779_6_66
Type: STP
Location: 78420 - 79748 (-)
Type: STP
Location: 78420 - 79748 (-)
Gene ID: HRGMv2_0779_6_67
Type: TC
Location: 79913 - 81712 (+)
Type: TC
Location: 79913 - 81712 (+)
Gene ID: HRGMv2_0779_6_68
Type: TF
Location: 81714 - 83204 (+)
Type: TF
Location: 81714 - 83204 (+)
Gene ID: HRGMv2_0779_6_69
Type: CAZyme
Location: 83208 - 84863 (+)
Type: CAZyme
Location: 83208 - 84863 (+)
Gene ID: HRGMv2_0779_6_70
Type:
Location: 86234 - 86860 (+)
Type:
Location: 86234 - 86860 (+)
Gene ID: HRGMv2_0779_6_71
Type:
Location: 86854 - 87306 (+)
Type:
Location: 86854 - 87306 (+)
Gene ID: HRGMv2_0779_6_72
Type: TC
Location: 87410 - 88123 (+)
Type: TC
Location: 87410 - 88123 (+)
Gene ID: HRGMv2_0779_6_73
Type: TC
Location: 88117 - 89715 (+)
Type: TC
Location: 88117 - 89715 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
CAG-1024
Species
CAG-1024 sp000432015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.