Cluster: HRGMv2_0779_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: HRGMv2_0779
- CGC Family ID: CGCFAM_00107
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0779_6 | HRGMv2_0779_6_14 | 19598 | 20581 | - | 3.A.1.2.15 |
| pfam | HRGMv2_0779_6 | HRGMv2_0779_6_15 | 20578 | 21654 | - | BPD_transp_2 |
| TC | HRGMv2_0779_6 | HRGMv2_0779_6_16 | 21651 | 23186 | - | 3.A.1.2.20 |
| pfam | HRGMv2_0779_6 | HRGMv2_0779_6_17 | 23447 | 24577 | - | Peripla_BP_4 |
| pfam | HRGMv2_0779_6 | HRGMv2_0779_6_18 | 24850 | 25794 | - | AP_endonuc_2 |
| CAZyme | HRGMv2_0779_6 | HRGMv2_0779_6_19 | 25903 | 27024 | - | GH179 |
Gene ID: HRGMv2_0779_6_14
Type: TC
Location: 19598 - 20581 (-)
Type: TC
Location: 19598 - 20581 (-)
Gene ID: HRGMv2_0779_6_15
Type: pfam
Location: 20578 - 21654 (-)
Type: pfam
Location: 20578 - 21654 (-)
Gene ID: HRGMv2_0779_6_16
Type: TC
Location: 21651 - 23186 (-)
Type: TC
Location: 21651 - 23186 (-)
Gene ID: HRGMv2_0779_6_17
Type: pfam
Location: 23447 - 24577 (-)
Type: pfam
Location: 23447 - 24577 (-)
Gene ID: HRGMv2_0779_6_18
Type: pfam
Location: 24850 - 25794 (-)
Type: pfam
Location: 24850 - 25794 (-)
Gene ID: HRGMv2_0779_6_19
Type: CAZyme
Location: 25903 - 27024 (-)
Type: CAZyme
Location: 25903 - 27024 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
CAG-1024
Species
CAG-1024 sp000432015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.