Cluster: HRGMv2_0779_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0779
- CGC Family ID: CGCFAM_00018
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0779_5 | HRGMv2_0779_5_3 | 2852 | 3973 | + | CE9 |
| CAZyme | HRGMv2_0779_5 | HRGMv2_0779_5_4 | 4109 | 5332 | + | GT4 |
| TC | HRGMv2_0779_5 | HRGMv2_0779_5_5 | 5308 | 6348 | + | 9.B.18.2.1 |
| pfam | HRGMv2_0779_5 | HRGMv2_0779_5_6 | 6345 | 7478 | + | Epimerase | Polysacc_synt_C |
| pfam | HRGMv2_0779_5 | HRGMv2_0779_5_7 | 7484 | 8629 | + | Epimerase_2 |
| CAZyme | HRGMv2_0779_5 | HRGMv2_0779_5_8 | 8626 | 9858 | + | GT4 |
Gene ID: HRGMv2_0779_5_3
Type: CAZyme
Location: 2852 - 3973 (+)
Type: CAZyme
Location: 2852 - 3973 (+)
Gene ID: HRGMv2_0779_5_4
Type: CAZyme
Location: 4109 - 5332 (+)
Type: CAZyme
Location: 4109 - 5332 (+)
Gene ID: HRGMv2_0779_5_5
Type: TC
Location: 5308 - 6348 (+)
Type: TC
Location: 5308 - 6348 (+)
Gene ID: HRGMv2_0779_5_6
Type: pfam
Location: 6345 - 7478 (+)
Type: pfam
Location: 6345 - 7478 (+)
Gene ID: HRGMv2_0779_5_7
Type: pfam
Location: 7484 - 8629 (+)
Type: pfam
Location: 7484 - 8629 (+)
Gene ID: HRGMv2_0779_5_8
Type: CAZyme
Location: 8626 - 9858 (+)
Type: CAZyme
Location: 8626 - 9858 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
CAG-1024
Species
CAG-1024 sp000432015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.