Cluster: HRGMv2_0779_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0779
- CGC Family ID: CGCFAM_06039
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0779_31 | HRGMv2_0779_31_2 | 3139 | 4239 | + | GT28 |
| pfam | HRGMv2_0779_31 | HRGMv2_0779_31_3 | 4232 | 5752 | + | UPF0020 | MTS | PrmA | Methyltransf_25 | Methyltransf_31 |
| TF | HRGMv2_0779_31 | HRGMv2_0779_31_4 | 5824 | 6654 | - | HTH_3 |
| TC | HRGMv2_0779_31 | HRGMv2_0779_31_5 | 6781 | 7278 | - | 9.B.156.3.1 |
| TC | HRGMv2_0779_31 | HRGMv2_0779_31_6 | 7275 | 7904 | - | 9.B.156.3.1 |
Gene ID: HRGMv2_0779_31_2
Type: CAZyme
Location: 3139 - 4239 (+)
Type: CAZyme
Location: 3139 - 4239 (+)
Gene ID: HRGMv2_0779_31_3
Type: pfam
Location: 4232 - 5752 (+)
Type: pfam
Location: 4232 - 5752 (+)
Gene ID: HRGMv2_0779_31_4
Type: TF
Location: 5824 - 6654 (-)
Type: TF
Location: 5824 - 6654 (-)
Gene ID: HRGMv2_0779_31_5
Type: TC
Location: 6781 - 7278 (-)
Type: TC
Location: 6781 - 7278 (-)
Gene ID: HRGMv2_0779_31_6
Type: TC
Location: 7275 - 7904 (-)
Type: TC
Location: 7275 - 7904 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
CAG-1024
Species
CAG-1024 sp000432015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.