Cluster: HRGMv2_0770_CGC8
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0770
- CGC Family ID: CGCFAM_02467
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0770_5 | HRGMv2_0770_5_49 | 52112 | 54505 | - | GH31_15 |
| pfam | HRGMv2_0770_5 | HRGMv2_0770_5_50 | 54487 | 55164 | - | Hydrolase | HAD_2 |
| CAZyme | HRGMv2_0770_5 | HRGMv2_0770_5_51 | 55161 | 57887 | - | GH31_7 |
| TC | HRGMv2_0770_5 | HRGMv2_0770_5_52 | 57892 | 58842 | - | 3.A.1.1.45 |
| TC | HRGMv2_0770_5 | HRGMv2_0770_5_53 | 58839 | 59777 | - | 3.A.1.1.11 |
| pfam | HRGMv2_0770_5 | HRGMv2_0770_5_54 | 59786 | 62053 | - | DUF5696 |
| pfam | HRGMv2_0770_5 | HRGMv2_0770_5_55 | 62040 | 64079 | - | NHL | NHL | Yip1 |
| TC | HRGMv2_0770_5 | HRGMv2_0770_5_56 | 64093 | 65013 | - | 3.A.1.1.39 |
| TC | HRGMv2_0770_5 | HRGMv2_0770_5_57 | 65010 | 65930 | - | 3.A.1.1.34 |
| STP | HRGMv2_0770_5 | HRGMv2_0770_5_58 | 65927 | 68842 | - | SBP_bac_1 |
| STP | HRGMv2_0770_5 | HRGMv2_0770_5_59 | 69109 | 70635 | - | SBP_bac_1 |
| CAZyme | HRGMv2_0770_5 | HRGMv2_0770_5_60 | 70733 | 72937 | - | GH65 |
| CAZyme | HRGMv2_0770_5 | HRGMv2_0770_5_61 | 72950 | 74755 | - | GH125 |
| CAZyme | HRGMv2_0770_5 | HRGMv2_0770_5_62 | 74752 | 77424 | - | GH31_7 |
Gene ID: HRGMv2_0770_5_49
Type: CAZyme
Location: 52112 - 54505 (-)
Type: CAZyme
Location: 52112 - 54505 (-)
Gene ID: HRGMv2_0770_5_50
Type: pfam
Location: 54487 - 55164 (-)
Type: pfam
Location: 54487 - 55164 (-)
Gene ID: HRGMv2_0770_5_51
Type: CAZyme
Location: 55161 - 57887 (-)
Type: CAZyme
Location: 55161 - 57887 (-)
Gene ID: HRGMv2_0770_5_52
Type: TC
Location: 57892 - 58842 (-)
Type: TC
Location: 57892 - 58842 (-)
Gene ID: HRGMv2_0770_5_53
Type: TC
Location: 58839 - 59777 (-)
Type: TC
Location: 58839 - 59777 (-)
Gene ID: HRGMv2_0770_5_54
Type: pfam
Location: 59786 - 62053 (-)
Type: pfam
Location: 59786 - 62053 (-)
Gene ID: HRGMv2_0770_5_55
Type: pfam
Location: 62040 - 64079 (-)
Type: pfam
Location: 62040 - 64079 (-)
Gene ID: HRGMv2_0770_5_56
Type: TC
Location: 64093 - 65013 (-)
Type: TC
Location: 64093 - 65013 (-)
Gene ID: HRGMv2_0770_5_57
Type: TC
Location: 65010 - 65930 (-)
Type: TC
Location: 65010 - 65930 (-)
Gene ID: HRGMv2_0770_5_58
Type: STP
Location: 65927 - 68842 (-)
Type: STP
Location: 65927 - 68842 (-)
Gene ID: HRGMv2_0770_5_59
Type: STP
Location: 69109 - 70635 (-)
Type: STP
Location: 69109 - 70635 (-)
Gene ID: HRGMv2_0770_5_60
Type: CAZyme
Location: 70733 - 72937 (-)
Type: CAZyme
Location: 70733 - 72937 (-)
Gene ID: HRGMv2_0770_5_61
Type: CAZyme
Location: 72950 - 74755 (-)
Type: CAZyme
Location: 72950 - 74755 (-)
Gene ID: HRGMv2_0770_5_62
Type: CAZyme
Location: 74752 - 77424 (-)
Type: CAZyme
Location: 74752 - 77424 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.