Cluster: HRGMv2_0770_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0770
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0770_5 | HRGMv2_0770_5_22 | 21093 | 23780 | + | 3.A.12.1.1 |
| pfam | HRGMv2_0770_5 | HRGMv2_0770_5_23 | 23777 | 25069 | + | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_0770_5 | HRGMv2_0770_5_24 | 25066 | 25611 | + | 4.F.1.1.7 |
| pfam | HRGMv2_0770_5 | HRGMv2_0770_5_25 | 25608 | 26855 | + | MoCF_biosynth | CinA | CinA_KH |
| STP | HRGMv2_0770_5 | HRGMv2_0770_5_26 | 26944 | 28017 | + | ATPase_2 |
| CAZyme | HRGMv2_0770_5 | HRGMv2_0770_5_27 | 28010 | 29302 | + | GT4 |
Gene ID: HRGMv2_0770_5_22
Type: TC
Location: 21093 - 23780 (+)
Type: TC
Location: 21093 - 23780 (+)
Gene ID: HRGMv2_0770_5_23
Type: pfam
Location: 23777 - 25069 (+)
Type: pfam
Location: 23777 - 25069 (+)
Gene ID: HRGMv2_0770_5_24
Type: TC
Location: 25066 - 25611 (+)
Type: TC
Location: 25066 - 25611 (+)
Gene ID: HRGMv2_0770_5_25
Type: pfam
Location: 25608 - 26855 (+)
Type: pfam
Location: 25608 - 26855 (+)
Gene ID: HRGMv2_0770_5_26
Type: STP
Location: 26944 - 28017 (+)
Type: STP
Location: 26944 - 28017 (+)
Gene ID: HRGMv2_0770_5_27
Type: CAZyme
Location: 28010 - 29302 (+)
Type: CAZyme
Location: 28010 - 29302 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.