Cluster: HRGMv2_0770_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0770
- CGC Family ID: CGCFAM_06024
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0770_38 | HRGMv2_0770_38_7 | 10863 | 11966 | - | GT28 |
| pfam | HRGMv2_0770_38 | HRGMv2_0770_38_8 | 12208 | 14928 | - | Transpeptidase | Transpeptidase | PBP_dimer | MecA_N |
| TC | HRGMv2_0770_38 | HRGMv2_0770_38_9 | 15137 | 15916 | - | 3.A.1.15.9 |
| TC | HRGMv2_0770_38 | HRGMv2_0770_38_10 | 15913 | 16920 | - | 3.A.1.14.11 |
| STP | HRGMv2_0770_38 | HRGMv2_0770_38_11 | 16933 | 18024 | - | Peripla_BP_2 |
| TC | HRGMv2_0770_38 | HRGMv2_0770_38_12 | 19189 | 19806 | + | 9.B.156.3.1 |
| TC | HRGMv2_0770_38 | HRGMv2_0770_38_13 | 19803 | 20312 | + | 9.B.156.3.1 |
Gene ID: HRGMv2_0770_38_7
Type: CAZyme
Location: 10863 - 11966 (-)
Type: CAZyme
Location: 10863 - 11966 (-)
Gene ID: HRGMv2_0770_38_8
Type: pfam
Location: 12208 - 14928 (-)
Type: pfam
Location: 12208 - 14928 (-)
Gene ID: HRGMv2_0770_38_9
Type: TC
Location: 15137 - 15916 (-)
Type: TC
Location: 15137 - 15916 (-)
Gene ID: HRGMv2_0770_38_10
Type: TC
Location: 15913 - 16920 (-)
Type: TC
Location: 15913 - 16920 (-)
Gene ID: HRGMv2_0770_38_11
Type: STP
Location: 16933 - 18024 (-)
Type: STP
Location: 16933 - 18024 (-)
Gene ID: HRGMv2_0770_38_12
Type: TC
Location: 19189 - 19806 (+)
Type: TC
Location: 19189 - 19806 (+)
Gene ID: HRGMv2_0770_38_13
Type: TC
Location: 19803 - 20312 (+)
Type: TC
Location: 19803 - 20312 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.