Cluster: HRGMv2_0770_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_0770
- CGC Family ID: CGCFAM_00045
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0770_25 | HRGMv2_0770_25_16 | 17339 | 19663 | - | CBM20 | CBM20 | GH13_1 |
| CAZyme | HRGMv2_0770_25 | HRGMv2_0770_25_17 | 19815 | 21533 | - | CBM34 | GH13_20 |
| TC | HRGMv2_0770_25 | HRGMv2_0770_25_18 | 21561 | 22400 | - | 3.A.1.1.6 |
| TC | HRGMv2_0770_25 | HRGMv2_0770_25_19 | 22415 | 23299 | - | 3.A.1.1.41 |
| TC | HRGMv2_0770_25 | HRGMv2_0770_25_20 | 23366 | 24649 | - | 3.A.1.1.16 |
Gene ID: HRGMv2_0770_25_16
Type: CAZyme
Location: 17339 - 19663 (-)
Type: CAZyme
Location: 17339 - 19663 (-)
Gene ID: HRGMv2_0770_25_17
Type: CAZyme
Location: 19815 - 21533 (-)
Type: CAZyme
Location: 19815 - 21533 (-)
Gene ID: HRGMv2_0770_25_18
Type: TC
Location: 21561 - 22400 (-)
Type: TC
Location: 21561 - 22400 (-)
Gene ID: HRGMv2_0770_25_19
Type: TC
Location: 22415 - 23299 (-)
Type: TC
Location: 22415 - 23299 (-)
Gene ID: HRGMv2_0770_25_20
Type: TC
Location: 23366 - 24649 (-)
Type: TC
Location: 23366 - 24649 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.