Cluster: HRGMv2_0770_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0770
- CGC Family ID: CGCFAM_00121
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0770_22 | HRGMv2_0770_22_18 | 17693 | 18574 | - | 3.A.1.1.36 |
| TC | HRGMv2_0770_22 | HRGMv2_0770_22_19 | 18590 | 19483 | - | 3.A.1.1.36 |
| STP | HRGMv2_0770_22 | HRGMv2_0770_22_20 | 19602 | 20939 | - | SBP_bac_1 |
| TC | HRGMv2_0770_22 | HRGMv2_0770_22_21 | 21117 | 22859 | - | 8.A.59.2.1 |
| pfam | HRGMv2_0770_22 | HRGMv2_0770_22_22 | 22863 | 24287 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_0770_22 | HRGMv2_0770_22_23 | 24284 | 26698 | - | GH94 |
Gene ID: HRGMv2_0770_22_18
Type: TC
Location: 17693 - 18574 (-)
Type: TC
Location: 17693 - 18574 (-)
Gene ID: HRGMv2_0770_22_19
Type: TC
Location: 18590 - 19483 (-)
Type: TC
Location: 18590 - 19483 (-)
Gene ID: HRGMv2_0770_22_20
Type: STP
Location: 19602 - 20939 (-)
Type: STP
Location: 19602 - 20939 (-)
Gene ID: HRGMv2_0770_22_21
Type: TC
Location: 21117 - 22859 (-)
Type: TC
Location: 21117 - 22859 (-)
Gene ID: HRGMv2_0770_22_22
Type: pfam
Location: 22863 - 24287 (-)
Type: pfam
Location: 22863 - 24287 (-)
Gene ID: HRGMv2_0770_22_23
Type: CAZyme
Location: 24284 - 26698 (-)
Type: CAZyme
Location: 24284 - 26698 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.