Cluster: HRGMv2_0770_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0770
- CGC Family ID: CGCFAM_00308
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0770_17 | HRGMv2_0770_17_26 | 29910 | 30806 | + | 3.A.1.1.20 |
| TC | HRGMv2_0770_17 | HRGMv2_0770_17_27 | 30818 | 31696 | + | 3.A.1.1.34 |
| CAZyme | HRGMv2_0770_17 | HRGMv2_0770_17_28 | 31721 | 33010 | + | GH13 |
| CAZyme | HRGMv2_0770_17 | HRGMv2_0770_17_29 | 33019 | 35424 | + | GH31_15 |
Gene ID: HRGMv2_0770_17_26
Type: TC
Location: 29910 - 30806 (+)
Type: TC
Location: 29910 - 30806 (+)
Gene ID: HRGMv2_0770_17_27
Type: TC
Location: 30818 - 31696 (+)
Type: TC
Location: 30818 - 31696 (+)
Gene ID: HRGMv2_0770_17_28
Type: CAZyme
Location: 31721 - 33010 (+)
Type: CAZyme
Location: 31721 - 33010 (+)
Gene ID: HRGMv2_0770_17_29
Type: CAZyme
Location: 33019 - 35424 (+)
Type: CAZyme
Location: 33019 - 35424 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.