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Cluster: HRGMv2_0770_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0770_1 HRGMv2_0770_1_19 19555 20301 + 9.B.18.1.2
CAZyme HRGMv2_0770_1 HRGMv2_0770_1_20 20305 21066 + GT2
CAZyme HRGMv2_0770_1 HRGMv2_0770_1_21 21142 22224 + GT4
pfam HRGMv2_0770_1 HRGMv2_0770_1_22 22268 23203 + 3Beta_HSD | Epimerase | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
NULL(UNKNOWN) HRGMv2_0770_1 HRGMv2_0770_1_23 23300 24709 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0770_1 HRGMv2_0770_1_24 24706 25644 + GT2
NULL(UNKNOWN) HRGMv2_0770_1 HRGMv2_0770_1_25 25641 25793 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0770_1 HRGMv2_0770_1_26 25810 27273 + 2.A.66.2.7
Gene ID: HRGMv2_0770_1_19
Type: TC
Location: 19555 - 20301 (+)
Gene ID: HRGMv2_0770_1_20
Type: CAZyme
Location: 20305 - 21066 (+)
Gene ID: HRGMv2_0770_1_21
Type: CAZyme
Location: 21142 - 22224 (+)
Gene ID: HRGMv2_0770_1_22
Type: pfam
Location: 22268 - 23203 (+)
Gene ID: HRGMv2_0770_1_23
Type:
Location: 23300 - 24709 (+)
Gene ID: HRGMv2_0770_1_24
Type: CAZyme
Location: 24706 - 25644 (+)
Gene ID: HRGMv2_0770_1_25
Type:
Location: 25641 - 25793 (+)
Gene ID: HRGMv2_0770_1_26
Type: TC
Location: 25810 - 27273 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
CAG-138
→
Genus
Aphodomorpha
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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