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Cluster: HRGMv2_0769_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0769_34 HRGMv2_0769_34_6 4147 4830 - GT2
pfam HRGMv2_0769_34 HRGMv2_0769_34_7 4851 6827 - DUF2142
TC HRGMv2_0769_34 HRGMv2_0769_34_8 6837 7571 - 3.A.1.103.1
TC HRGMv2_0769_34 HRGMv2_0769_34_9 7585 8430 - 3.A.1.103.6
CAZyme HRGMv2_0769_34 HRGMv2_0769_34_10 8449 10428 - GT2 | GT2
CAZyme HRGMv2_0769_34 HRGMv2_0769_34_11 10421 12358 - GT2 | GT2
Gene ID: HRGMv2_0769_34_6
Type: CAZyme
Location: 4147 - 4830 (-)
Gene ID: HRGMv2_0769_34_7
Type: pfam
Location: 4851 - 6827 (-)
Gene ID: HRGMv2_0769_34_8
Type: TC
Location: 6837 - 7571 (-)
Gene ID: HRGMv2_0769_34_9
Type: TC
Location: 7585 - 8430 (-)
Gene ID: HRGMv2_0769_34_10
Type: CAZyme
Location: 8449 - 10428 (-)
Gene ID: HRGMv2_0769_34_11
Type: CAZyme
Location: 10421 - 12358 (-)

Taxonomic Lineage

Domain
Bacteria
Family
QALW01

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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