Cluster: HRGMv2_0769_CGC12
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0769
- CGC Family ID: CGCFAM_03568
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0769_18 | HRGMv2_0769_18_19 | 18125 | 18919 | - | 3.D.6.1.3 |
| TC | HRGMv2_0769_18 | HRGMv2_0769_18_20 | 18932 | 19519 | - | 3.D.6.1.2 |
| TC | HRGMv2_0769_18 | HRGMv2_0769_18_21 | 19520 | 20227 | - | 3.D.6.1.2 |
| pfam | HRGMv2_0769_18 | HRGMv2_0769_18_22 | 20233 | 20805 | - | FMN_bind |
| TC | HRGMv2_0769_18 | HRGMv2_0769_18_23 | 20808 | 21752 | - | 3.D.6.1.2 |
| TC | HRGMv2_0769_18 | HRGMv2_0769_18_24 | 21754 | 23067 | - | 3.D.6.1.2 |
| TC | HRGMv2_0769_18 | HRGMv2_0769_18_25 | 23064 | 23576 | - | 2.A.87.3.2 |
| pfam | HRGMv2_0769_18 | HRGMv2_0769_18_26 | 23573 | 23899 | - | NusG_II |
| pfam | HRGMv2_0769_18 | HRGMv2_0769_18_27 | 23896 | 24876 | - | ApbE |
| TC | HRGMv2_0769_18 | HRGMv2_0769_18_28 | 25026 | 25544 | - | 1.A.22.1.4 |
| NULL(UNKNOWN) | HRGMv2_0769_18 | HRGMv2_0769_18_29 | 25703 | 27139 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0769_18 | HRGMv2_0769_18_30 | 27136 | 28869 | + | CE20 |
| CAZyme | HRGMv2_0769_18 | HRGMv2_0769_18_31 | 28971 | 31322 | + | GH3 |
Gene ID: HRGMv2_0769_18_19
Type: TC
Location: 18125 - 18919 (-)
Type: TC
Location: 18125 - 18919 (-)
Gene ID: HRGMv2_0769_18_20
Type: TC
Location: 18932 - 19519 (-)
Type: TC
Location: 18932 - 19519 (-)
Gene ID: HRGMv2_0769_18_21
Type: TC
Location: 19520 - 20227 (-)
Type: TC
Location: 19520 - 20227 (-)
Gene ID: HRGMv2_0769_18_22
Type: pfam
Location: 20233 - 20805 (-)
Type: pfam
Location: 20233 - 20805 (-)
Gene ID: HRGMv2_0769_18_23
Type: TC
Location: 20808 - 21752 (-)
Type: TC
Location: 20808 - 21752 (-)
Gene ID: HRGMv2_0769_18_24
Type: TC
Location: 21754 - 23067 (-)
Type: TC
Location: 21754 - 23067 (-)
Gene ID: HRGMv2_0769_18_25
Type: TC
Location: 23064 - 23576 (-)
Type: TC
Location: 23064 - 23576 (-)
Gene ID: HRGMv2_0769_18_26
Type: pfam
Location: 23573 - 23899 (-)
Type: pfam
Location: 23573 - 23899 (-)
Gene ID: HRGMv2_0769_18_27
Type: pfam
Location: 23896 - 24876 (-)
Type: pfam
Location: 23896 - 24876 (-)
Gene ID: HRGMv2_0769_18_28
Type: TC
Location: 25026 - 25544 (-)
Type: TC
Location: 25026 - 25544 (-)
Gene ID: HRGMv2_0769_18_29
Type:
Location: 25703 - 27139 (+)
Type:
Location: 25703 - 27139 (+)
Gene ID: HRGMv2_0769_18_30
Type: CAZyme
Location: 27136 - 28869 (+)
Type: CAZyme
Location: 27136 - 28869 (+)
Gene ID: HRGMv2_0769_18_31
Type: CAZyme
Location: 28971 - 31322 (+)
Type: CAZyme
Location: 28971 - 31322 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
QALW01
Genus
UMGS1322
Species
UMGS1322 sp934434555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.