Cluster: HRGMv2_0768_CGC8
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0768
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0768_2 | HRGMv2_0768_2_117 | 117184 | 118569 | - | 3.A.1.11.7 |
| TC | HRGMv2_0768_2 | HRGMv2_0768_2_118 | 118566 | 119426 | - | 3.A.1.11.2 |
| TC | HRGMv2_0768_2 | HRGMv2_0768_2_119 | 119423 | 120259 | - | 3.A.1.11.8 |
| TC | HRGMv2_0768_2 | HRGMv2_0768_2_120 | 120256 | 121377 | - | 3.A.1.11.8 |
| TF | HRGMv2_0768_2 | HRGMv2_0768_2_121 | 121386 | 121919 | - | HTH_3 |
| CAZyme | HRGMv2_0768_2 | HRGMv2_0768_2_122 | 122511 | 123635 | + | GH27 |
| CAZyme | HRGMv2_0768_2 | HRGMv2_0768_2_123 | 123810 | 124937 | + | GH27 |
| NULL(UNKNOWN) | HRGMv2_0768_2 | HRGMv2_0768_2_124 | 124924 | 125142 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_0768_2 | HRGMv2_0768_2_125 | 126085 | 126939 | - | HTH_AraC |
| CAZyme | HRGMv2_0768_2 | HRGMv2_0768_2_126 | 127073 | 128122 | + | GH172 |
| CAZyme | HRGMv2_0768_2 | HRGMv2_0768_2_127 | 128955 | 131024 | + | GH140 |
Gene ID: HRGMv2_0768_2_117
Type: TC
Location: 117184 - 118569 (-)
Type: TC
Location: 117184 - 118569 (-)
Gene ID: HRGMv2_0768_2_118
Type: TC
Location: 118566 - 119426 (-)
Type: TC
Location: 118566 - 119426 (-)
Gene ID: HRGMv2_0768_2_119
Type: TC
Location: 119423 - 120259 (-)
Type: TC
Location: 119423 - 120259 (-)
Gene ID: HRGMv2_0768_2_120
Type: TC
Location: 120256 - 121377 (-)
Type: TC
Location: 120256 - 121377 (-)
Gene ID: HRGMv2_0768_2_121
Type: TF
Location: 121386 - 121919 (-)
Type: TF
Location: 121386 - 121919 (-)
Gene ID: HRGMv2_0768_2_122
Type: CAZyme
Location: 122511 - 123635 (+)
Type: CAZyme
Location: 122511 - 123635 (+)
Gene ID: HRGMv2_0768_2_123
Type: CAZyme
Location: 123810 - 124937 (+)
Type: CAZyme
Location: 123810 - 124937 (+)
Gene ID: HRGMv2_0768_2_124
Type:
Location: 124924 - 125142 (+)
Type:
Location: 124924 - 125142 (+)
Gene ID: HRGMv2_0768_2_125
Type: TF
Location: 126085 - 126939 (-)
Type: TF
Location: 126085 - 126939 (-)
Gene ID: HRGMv2_0768_2_126
Type: CAZyme
Location: 127073 - 128122 (+)
Type: CAZyme
Location: 127073 - 128122 (+)
Gene ID: HRGMv2_0768_2_127
Type: CAZyme
Location: 128955 - 131024 (+)
Type: CAZyme
Location: 128955 - 131024 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
QALW01
Genus
UMGS1322
Species
UMGS1322 sp905214315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.