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Cluster: HRGMv2_0768_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0768_11 HRGMv2_0768_11_17 28021 30651 + 4.A.2.1.17
NULL(UNKNOWN) HRGMv2_0768_11 HRGMv2_0768_11_18 30943 31467 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0768_11 HRGMv2_0768_11_19 31523 32914 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0768_11 HRGMv2_0768_11_20 32922 33563 - 3.A.1.124.5
NULL(UNKNOWN) HRGMv2_0768_11 HRGMv2_0768_11_21 33581 34396 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0768_11 HRGMv2_0768_11_22 34389 35195 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0768_11 HRGMv2_0768_11_23 35831 38752 - GH106
Gene ID: HRGMv2_0768_11_17
Type: TC
Location: 28021 - 30651 (+)
Gene ID: HRGMv2_0768_11_18
Type:
Location: 30943 - 31467 (-)
Gene ID: HRGMv2_0768_11_19
Type:
Location: 31523 - 32914 (-)
Gene ID: HRGMv2_0768_11_20
Type: TC
Location: 32922 - 33563 (-)
Gene ID: HRGMv2_0768_11_21
Type:
Location: 33581 - 34396 (-)
Gene ID: HRGMv2_0768_11_22
Type:
Location: 34389 - 35195 (-)
Gene ID: HRGMv2_0768_11_23
Type: CAZyme
Location: 35831 - 38752 (-)

Taxonomic Lineage

Domain
Bacteria
Family
QALW01

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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