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Cluster: HRGMv2_0766_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0766_3 HRGMv2_0766_3_125 120518 121936 - 3.B.1.1.6
TC HRGMv2_0766_3 HRGMv2_0766_3_126 122003 123511 - 3.B.1.1.1
TC HRGMv2_0766_3 HRGMv2_0766_3_127 123524 123883 - 3.B.1.1.2
pfam HRGMv2_0766_3 HRGMv2_0766_3_128 123896 124231 - OAD_gamma
TC HRGMv2_0766_3 HRGMv2_0766_3_129 124242 125615 - 3.B.1.1.2
pfam HRGMv2_0766_3 HRGMv2_0766_3_130 125810 126826 - adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
pfam HRGMv2_0766_3 HRGMv2_0766_3_131 126823 128367 - GalP_UDP_transf | GalP_UDP_tr_C
CAZyme HRGMv2_0766_3 HRGMv2_0766_3_132 128461 131310 - GH2
Gene ID: HRGMv2_0766_3_125
Type: TC
Location: 120518 - 121936 (-)
Gene ID: HRGMv2_0766_3_126
Type: TC
Location: 122003 - 123511 (-)
Gene ID: HRGMv2_0766_3_127
Type: TC
Location: 123524 - 123883 (-)
Gene ID: HRGMv2_0766_3_128
Type: pfam
Location: 123896 - 124231 (-)
Gene ID: HRGMv2_0766_3_129
Type: TC
Location: 124242 - 125615 (-)
Gene ID: HRGMv2_0766_3_130
Type: pfam
Location: 125810 - 126826 (-)
Gene ID: HRGMv2_0766_3_131
Type: pfam
Location: 126823 - 128367 (-)
Gene ID: HRGMv2_0766_3_132
Type: CAZyme
Location: 128461 - 131310 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0766_3_125 vegetarian > omnivore 1.41627 0.04909

🧭 Explore Read Mapping of CGC

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