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Cluster: HRGMv2_0766_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0766_2 HRGMv2_0766_2_146 172302 174431 - GH43_29
NULL(UNKNOWN) HRGMv2_0766_2 HRGMv2_0766_2_147 174447 176339 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0766_2 HRGMv2_0766_2_148 176774 179365 - GH51_2
pfam HRGMv2_0766_2 HRGMv2_0766_2_149 179497 179877 - SpoVAC_SpoVAEB
TC HRGMv2_0766_2 HRGMv2_0766_2_150 179879 180883 - 9.A.11.1.1
NULL(UNKNOWN) HRGMv2_0766_2 HRGMv2_0766_2_151 181005 181136 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0766_2 HRGMv2_0766_2_152 181413 184124 - 3.A.3.4.1
TC HRGMv2_0766_2 HRGMv2_0766_2_153 184584 186383 - 3.A.1.135.5
TC HRGMv2_0766_2 HRGMv2_0766_2_154 186380 188095 - 3.A.1.135.5
pfam HRGMv2_0766_2 HRGMv2_0766_2_155 188286 189020 + SIMPL
pfam HRGMv2_0766_2 HRGMv2_0766_2_156 189105 190580 - SpoIVA_ATPase | SpoIVA_middle | SpoIVA_C
TC HRGMv2_0766_2 HRGMv2_0766_2_157 190657 191391 - 9.B.31.1.2
Gene ID: HRGMv2_0766_2_146
Type: CAZyme
Location: 172302 - 174431 (-)
Gene ID: HRGMv2_0766_2_147
Type:
Location: 174447 - 176339 (-)
Gene ID: HRGMv2_0766_2_148
Type: CAZyme
Location: 176774 - 179365 (-)
Gene ID: HRGMv2_0766_2_149
Type: pfam
Location: 179497 - 179877 (-)
Gene ID: HRGMv2_0766_2_150
Type: TC
Location: 179879 - 180883 (-)
Gene ID: HRGMv2_0766_2_151
Type:
Location: 181005 - 181136 (+)
Gene ID: HRGMv2_0766_2_152
Type: TC
Location: 181413 - 184124 (-)
Gene ID: HRGMv2_0766_2_153
Type: TC
Location: 184584 - 186383 (-)
Gene ID: HRGMv2_0766_2_154
Type: TC
Location: 186380 - 188095 (-)
Gene ID: HRGMv2_0766_2_155
Type: pfam
Location: 188286 - 189020 (+)
Gene ID: HRGMv2_0766_2_156
Type: pfam
Location: 189105 - 190580 (-)
Gene ID: HRGMv2_0766_2_157
Type: TC
Location: 190657 - 191391 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0766_2_157 omnivore > vegetarian 4.67264 0.02921

🧭 Explore Read Mapping of CGC

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