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Cluster: HRGMv2_0766_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0766_17 HRGMv2_0766_17_3 1529 3205 + GH2
TF HRGMv2_0766_17 HRGMv2_0766_17_4 3214 4083 - HTH_AraC | HTH_AraC
STP HRGMv2_0766_17 HRGMv2_0766_17_5 4236 5513 + Pyr_redox_2
CAZyme HRGMv2_0766_17 HRGMv2_0766_17_6 5515 8349 + GH2
NULL(UNKNOWN) HRGMv2_0766_17 HRGMv2_0766_17_7 8397 11576 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0766_17 HRGMv2_0766_17_8 11592 13391 + Flg_new | Flg_new | SBP_bac_8
CAZyme HRGMv2_0766_17 HRGMv2_0766_17_9 13401 15410 + GH97
STP HRGMv2_0766_17 HRGMv2_0766_17_10 15421 16833 + SBP_bac_1
TC HRGMv2_0766_17 HRGMv2_0766_17_11 16861 18867 + 3.A.1.1.34
TC HRGMv2_0766_17 HRGMv2_0766_17_12 18901 20670 + 3.A.1.1.26
Gene ID: HRGMv2_0766_17_3
Type: CAZyme
Location: 1529 - 3205 (+)
Gene ID: HRGMv2_0766_17_4
Type: TF
Location: 3214 - 4083 (-)
Gene ID: HRGMv2_0766_17_5
Type: STP
Location: 4236 - 5513 (+)
Gene ID: HRGMv2_0766_17_6
Type: CAZyme
Location: 5515 - 8349 (+)
Gene ID: HRGMv2_0766_17_7
Type:
Location: 8397 - 11576 (+)
Gene ID: HRGMv2_0766_17_8
Type: pfam
Location: 11592 - 13391 (+)
Gene ID: HRGMv2_0766_17_9
Type: CAZyme
Location: 13401 - 15410 (+)
Gene ID: HRGMv2_0766_17_10
Type: STP
Location: 15421 - 16833 (+)
Gene ID: HRGMv2_0766_17_11
Type: TC
Location: 16861 - 18867 (+)
Gene ID: HRGMv2_0766_17_12
Type: TC
Location: 18901 - 20670 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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