Cluster: HRGMv2_0766_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0766
- CGC Family ID: CGCFAM_09786
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0766_13 | HRGMv2_0766_13_35 | 36903 | 37814 | - | 3.A.1.1.47 |
| pfam | HRGMv2_0766_13 | HRGMv2_0766_13_36 | 37826 | 38800 | - | BPD_transp_1 |
| TF | HRGMv2_0766_13 | HRGMv2_0766_13_37 | 38957 | 39865 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0766_13 | HRGMv2_0766_13_38 | 39875 | 41104 | - | GH109 |
| TC | HRGMv2_0766_13 | HRGMv2_0766_13_39 | 41432 | 42106 | - | 9.B.20.1.4 |
Gene ID: HRGMv2_0766_13_35
Type: TC
Location: 36903 - 37814 (-)
Type: TC
Location: 36903 - 37814 (-)
Gene ID: HRGMv2_0766_13_36
Type: pfam
Location: 37826 - 38800 (-)
Type: pfam
Location: 37826 - 38800 (-)
Gene ID: HRGMv2_0766_13_37
Type: TF
Location: 38957 - 39865 (+)
Type: TF
Location: 38957 - 39865 (+)
Gene ID: HRGMv2_0766_13_38
Type: CAZyme
Location: 39875 - 41104 (-)
Type: CAZyme
Location: 39875 - 41104 (-)
Gene ID: HRGMv2_0766_13_39
Type: TC
Location: 41432 - 42106 (-)
Type: TC
Location: 41432 - 42106 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944359365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.