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Cluster: HRGMv2_0766_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0766_7 HRGMv2_0766_7_28 27653 29293 - GH110
peptidase HRGMv2_0766_7 HRGMv2_0766_7_29 29300 29986 - S09.UPB
pfam HRGMv2_0766_7 HRGMv2_0766_7_30 30003 30641 - Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_0766_7 HRGMv2_0766_7_31 30868 32916 + 3.A.1.1.10
TC HRGMv2_0766_7 HRGMv2_0766_7_32 32913 33767 + 3.A.1.1.29
STP HRGMv2_0766_7 HRGMv2_0766_7_33 33820 35445 + SBP_bac_1
NULL(UNKNOWN) HRGMv2_0766_7 HRGMv2_0766_7_34 35449 35919 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0766_7 HRGMv2_0766_7_35 35929 37740 + GH136
Gene ID: HRGMv2_0766_7_28
Type: CAZyme
Location: 27653 - 29293 (-)
Gene ID: HRGMv2_0766_7_29
Type: peptidase
Location: 29300 - 29986 (-)
Gene ID: HRGMv2_0766_7_30
Type: pfam
Location: 30003 - 30641 (-)
Gene ID: HRGMv2_0766_7_31
Type: TC
Location: 30868 - 32916 (+)
Gene ID: HRGMv2_0766_7_32
Type: TC
Location: 32913 - 33767 (+)
Gene ID: HRGMv2_0766_7_33
Type: STP
Location: 33820 - 35445 (+)
Gene ID: HRGMv2_0766_7_34
Type:
Location: 35449 - 35919 (+)
Gene ID: HRGMv2_0766_7_35
Type: CAZyme
Location: 35929 - 37740 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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