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Cluster: HRGMv2_0766_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0766_1 HRGMv2_0766_1_212 213840 215156 + 3.A.5.1.1
pfam HRGMv2_0766_1 HRGMv2_0766_1_213 215341 215727 + Y1_Tnp
STP HRGMv2_0766_1 HRGMv2_0766_1_214 216428 217333 + PfkB
CAZyme HRGMv2_0766_1 HRGMv2_0766_1_215 217371 220982 + CBM66 | GH32
TF HRGMv2_0766_1 HRGMv2_0766_1_216 220985 221974 + LacI
TC HRGMv2_0766_1 HRGMv2_0766_1_217 222006 223337 + 3.A.1.1.20
TC HRGMv2_0766_1 HRGMv2_0766_1_218 223347 224330 + 3.A.1.1.20
TC HRGMv2_0766_1 HRGMv2_0766_1_219 224332 225216 + 3.A.1.1.20
CAZyme HRGMv2_0766_1 HRGMv2_0766_1_220 225227 227692 + GH32
CAZyme HRGMv2_0766_1 HRGMv2_0766_1_221 227703 230222 + CBM38 | CBM38 | CBM38 | CBM38
NULL(UNKNOWN) HRGMv2_0766_1 HRGMv2_0766_1_222 230244 234074 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0766_1 HRGMv2_0766_1_223 234128 235480 + GH32
Gene ID: HRGMv2_0766_1_212
Type: TC
Location: 213840 - 215156 (+)
Gene ID: HRGMv2_0766_1_213
Type: pfam
Location: 215341 - 215727 (+)
Gene ID: HRGMv2_0766_1_214
Type: STP
Location: 216428 - 217333 (+)
Gene ID: HRGMv2_0766_1_215
Type: CAZyme
Location: 217371 - 220982 (+)
Gene ID: HRGMv2_0766_1_216
Type: TF
Location: 220985 - 221974 (+)
Gene ID: HRGMv2_0766_1_217
Type: TC
Location: 222006 - 223337 (+)
Gene ID: HRGMv2_0766_1_218
Type: TC
Location: 223347 - 224330 (+)
Gene ID: HRGMv2_0766_1_219
Type: TC
Location: 224332 - 225216 (+)
Gene ID: HRGMv2_0766_1_220
Type: CAZyme
Location: 225227 - 227692 (+)
Gene ID: HRGMv2_0766_1_221
Type: CAZyme
Location: 227703 - 230222 (+)
Gene ID: HRGMv2_0766_1_222
Type:
Location: 230244 - 234074 (+)
Gene ID: HRGMv2_0766_1_223
Type: CAZyme
Location: 234128 - 235480 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0766_1_213 vegan > omnivore 2.31360 0.00953
HRGMv2_0766_1_213 vegetarian > omnivore 2.16965 0.01711
HRGMv2_0766_1_220 vegetarian > vegan 1.00789 0.03430

🧭 Explore Read Mapping of CGC

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