Cluster: HRGMv2_0764_CGC7
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0764
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0764_5 | HRGMv2_0764_5_59 | 72977 | 75403 | - | GH31_15 |
| sulfatase | HRGMv2_0764_5 | HRGMv2_0764_5_60 | 75423 | 77441 | - | S1_4 |
| TC | HRGMv2_0764_5 | HRGMv2_0764_5_61 | 77496 | 79250 | - | 3.A.1.1.27 |
| TC | HRGMv2_0764_5 | HRGMv2_0764_5_62 | 79251 | 81260 | - | 3.A.1.1.20 |
| STP | HRGMv2_0764_5 | HRGMv2_0764_5_63 | 81270 | 82703 | - | SBP_bac_1 |
| CAZyme | HRGMv2_0764_5 | HRGMv2_0764_5_64 | 82766 | 84766 | - | GH97 |
| pfam | HRGMv2_0764_5 | HRGMv2_0764_5_65 | 84780 | 86570 | - | Flg_new | Flg_new |
| NULL(UNKNOWN) | HRGMv2_0764_5 | HRGMv2_0764_5_66 | 86644 | 90870 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0764_5 | HRGMv2_0764_5_67 | 90951 | 92039 | - | GH5_37 |
| CAZyme | HRGMv2_0764_5 | HRGMv2_0764_5_68 | 92059 | 92859 | - | CE4 |
| pfam | HRGMv2_0764_5 | HRGMv2_0764_5_69 | 92880 | 93809 | - | EamA | EamA |
| TF | HRGMv2_0764_5 | HRGMv2_0764_5_70 | 93813 | 94502 | - | HTH_AraC |
| CAZyme | HRGMv2_0764_5 | HRGMv2_0764_5_71 | 94878 | 97739 | + | GH2 |
Gene ID: HRGMv2_0764_5_59
Type: CAZyme
Location: 72977 - 75403 (-)
Type: CAZyme
Location: 72977 - 75403 (-)
Gene ID: HRGMv2_0764_5_60
Type: sulfatase
Location: 75423 - 77441 (-)
Type: sulfatase
Location: 75423 - 77441 (-)
Gene ID: HRGMv2_0764_5_61
Type: TC
Location: 77496 - 79250 (-)
Type: TC
Location: 77496 - 79250 (-)
Gene ID: HRGMv2_0764_5_62
Type: TC
Location: 79251 - 81260 (-)
Type: TC
Location: 79251 - 81260 (-)
Gene ID: HRGMv2_0764_5_63
Type: STP
Location: 81270 - 82703 (-)
Type: STP
Location: 81270 - 82703 (-)
Gene ID: HRGMv2_0764_5_64
Type: CAZyme
Location: 82766 - 84766 (-)
Type: CAZyme
Location: 82766 - 84766 (-)
Gene ID: HRGMv2_0764_5_65
Type: pfam
Location: 84780 - 86570 (-)
Type: pfam
Location: 84780 - 86570 (-)
Gene ID: HRGMv2_0764_5_66
Type:
Location: 86644 - 90870 (-)
Type:
Location: 86644 - 90870 (-)
Gene ID: HRGMv2_0764_5_67
Type: CAZyme
Location: 90951 - 92039 (-)
Type: CAZyme
Location: 90951 - 92039 (-)
Gene ID: HRGMv2_0764_5_68
Type: CAZyme
Location: 92059 - 92859 (-)
Type: CAZyme
Location: 92059 - 92859 (-)
Gene ID: HRGMv2_0764_5_69
Type: pfam
Location: 92880 - 93809 (-)
Type: pfam
Location: 92880 - 93809 (-)
Gene ID: HRGMv2_0764_5_70
Type: TF
Location: 93813 - 94502 (-)
Type: TF
Location: 93813 - 94502 (-)
Gene ID: HRGMv2_0764_5_71
Type: CAZyme
Location: 94878 - 97739 (+)
Type: CAZyme
Location: 94878 - 97739 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.