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Cluster: HRGMv2_0764_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0764_5 HRGMv2_0764_5_11 11703 17771 - CBM51 | GH36
NULL(UNKNOWN) HRGMv2_0764_5 HRGMv2_0764_5_12 17773 20949 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0764_5 HRGMv2_0764_5_13 21188 22120 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_0764_5 HRGMv2_0764_5_14 22270 24003 - GH2
CAZyme HRGMv2_0764_5 HRGMv2_0764_5_15 24037 26427 - GH43_32
CAZyme HRGMv2_0764_5 HRGMv2_0764_5_16 26436 28928 - CBM66 | GH43_32
pfam HRGMv2_0764_5 HRGMv2_0764_5_17 28942 32733 - CarboxypepD_reg | CarboxypepD_reg
TC HRGMv2_0764_5 HRGMv2_0764_5_18 32761 33660 - 3.A.1.1.11
TC HRGMv2_0764_5 HRGMv2_0764_5_19 33667 34569 - 3.A.1.1.20
Gene ID: HRGMv2_0764_5_11
Type: CAZyme
Location: 11703 - 17771 (-)
Gene ID: HRGMv2_0764_5_12
Type:
Location: 17773 - 20949 (-)
Gene ID: HRGMv2_0764_5_13
Type: TF
Location: 21188 - 22120 (+)
Gene ID: HRGMv2_0764_5_14
Type: CAZyme
Location: 22270 - 24003 (-)
Gene ID: HRGMv2_0764_5_15
Type: CAZyme
Location: 24037 - 26427 (-)
Gene ID: HRGMv2_0764_5_16
Type: CAZyme
Location: 26436 - 28928 (-)
Gene ID: HRGMv2_0764_5_17
Type: pfam
Location: 28942 - 32733 (-)
Gene ID: HRGMv2_0764_5_18
Type: TC
Location: 32761 - 33660 (-)
Gene ID: HRGMv2_0764_5_19
Type: TC
Location: 33667 - 34569 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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