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Cluster: HRGMv2_0764_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0764_13 HRGMv2_0764_13_11 10369 12375 + 3.A.1.7.5
TC HRGMv2_0764_13 HRGMv2_0764_13_12 12387 13262 + 3.A.1.7.5
pfam HRGMv2_0764_13 HRGMv2_0764_13_13 13324 13980 + PhoU | PhoU
TC HRGMv2_0764_13 HRGMv2_0764_13_14 14147 15823 + 2.A.58.2.2
TF HRGMv2_0764_13 HRGMv2_0764_13_15 15828 16478 + Trans_reg_C
STP HRGMv2_0764_13 HRGMv2_0764_13_16 16576 17952 + HATPase_c | HisKA
CAZyme HRGMv2_0764_13 HRGMv2_0764_13_17 18313 20277 + GH51_2
Gene ID: HRGMv2_0764_13_11
Type: TC
Location: 10369 - 12375 (+)
Gene ID: HRGMv2_0764_13_12
Type: TC
Location: 12387 - 13262 (+)
Gene ID: HRGMv2_0764_13_13
Type: pfam
Location: 13324 - 13980 (+)
Gene ID: HRGMv2_0764_13_14
Type: TC
Location: 14147 - 15823 (+)
Gene ID: HRGMv2_0764_13_15
Type: TF
Location: 15828 - 16478 (+)
Gene ID: HRGMv2_0764_13_16
Type: STP
Location: 16576 - 17952 (+)
Gene ID: HRGMv2_0764_13_17
Type: CAZyme
Location: 18313 - 20277 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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