Cluster: HRGMv2_0764_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0764
- CGC Family ID: CGCFAM_05527
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0764_8 | HRGMv2_0764_8_78 | 91645 | 93447 | - | 1.A.33.1.4 |
| pfam | HRGMv2_0764_8 | HRGMv2_0764_8_79 | 93516 | 94106 | - | GrpE |
| sulfatase | HRGMv2_0764_8 | HRGMv2_0764_8_80 | 94275 | 95315 | - | S1_22 |
| CAZyme | HRGMv2_0764_8 | HRGMv2_0764_8_81 | 95421 | 96104 | + | CE4 |
| TC | HRGMv2_0764_8 | HRGMv2_0764_8_82 | 96058 | 98703 | - | 3.A.3.2.21 |
Gene ID: HRGMv2_0764_8_78
Type: TC
Location: 91645 - 93447 (-)
Type: TC
Location: 91645 - 93447 (-)
Gene ID: HRGMv2_0764_8_79
Type: pfam
Location: 93516 - 94106 (-)
Type: pfam
Location: 93516 - 94106 (-)
Gene ID: HRGMv2_0764_8_80
Type: sulfatase
Location: 94275 - 95315 (-)
Type: sulfatase
Location: 94275 - 95315 (-)
Gene ID: HRGMv2_0764_8_81
Type: CAZyme
Location: 95421 - 96104 (+)
Type: CAZyme
Location: 95421 - 96104 (+)
Gene ID: HRGMv2_0764_8_82
Type: TC
Location: 96058 - 98703 (-)
Type: TC
Location: 96058 - 98703 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.