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Cluster: HRGMv2_0760_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0760_3 HRGMv2_0760_3_50 50939 51652 - 3.A.1.132.6
CAZyme HRGMv2_0760_3 HRGMv2_0760_3_51 51944 54436 + GH140
TC HRGMv2_0760_3 HRGMv2_0760_3_52 54809 55405 - 2.A.115.2.14
pfam HRGMv2_0760_3 HRGMv2_0760_3_53 55398 56744 - MatE | MatE
CAZyme HRGMv2_0760_3 HRGMv2_0760_3_54 57813 58526 + GT2
Gene ID: HRGMv2_0760_3_50
Type: TC
Location: 50939 - 51652 (-)
Gene ID: HRGMv2_0760_3_51
Type: CAZyme
Location: 51944 - 54436 (+)
Gene ID: HRGMv2_0760_3_52
Type: TC
Location: 54809 - 55405 (-)
Gene ID: HRGMv2_0760_3_53
Type: pfam
Location: 55398 - 56744 (-)
Gene ID: HRGMv2_0760_3_54
Type: CAZyme
Location: 57813 - 58526 (+)

Taxonomic Lineage

Domain
Bacteria
Family
QALW01

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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