Cluster: HRGMv2_0759_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0759
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0759_1 | HRGMv2_0759_1_63 | 61966 | 62685 | + | CE4 |
| peptidase | HRGMv2_0759_1 | HRGMv2_0759_1_64 | 62700 | 63965 | + | M16.UPB |
| TC | HRGMv2_0759_1 | HRGMv2_0759_1_65 | 64063 | 67011 | + | 3.A.12.1.1 |
| pfam | HRGMv2_0759_1 | HRGMv2_0759_1_66 | 67011 | 68345 | + | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_0759_1 | HRGMv2_0759_1_67 | 68342 | 68947 | + | 4.F.1.1.8 |
Gene ID: HRGMv2_0759_1_63
Type: CAZyme
Location: 61966 - 62685 (+)
Type: CAZyme
Location: 61966 - 62685 (+)
Gene ID: HRGMv2_0759_1_64
Type: peptidase
Location: 62700 - 63965 (+)
Type: peptidase
Location: 62700 - 63965 (+)
Gene ID: HRGMv2_0759_1_65
Type: TC
Location: 64063 - 67011 (+)
Type: TC
Location: 64063 - 67011 (+)
Gene ID: HRGMv2_0759_1_66
Type: pfam
Location: 67011 - 68345 (+)
Type: pfam
Location: 67011 - 68345 (+)
Gene ID: HRGMv2_0759_1_67
Type: TC
Location: 68342 - 68947 (+)
Type: TC
Location: 68342 - 68947 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
CAG-314
Species
CAG-314 sp900551395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0759_1_63 | omnivore > vegetarian | 21.72061 | 0.02332 |
| HRGMv2_0759_1_65 | omnivore > vegetarian | 21.18075 | 0.02332 |
| HRGMv2_0759_1_66 | omnivore > vegetarian | 21.19584 | 0.02332 |
| HRGMv2_0759_1_67 | omnivore > vegetarian | 20.30691 | 0.03894 |