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Cluster: HRGMv2_0758_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0758_25 HRGMv2_0758_25_4 4442 6721 - GH94
CAZyme HRGMv2_0758_25 HRGMv2_0758_25_5 6734 8773 - GH36
CAZyme HRGMv2_0758_25 HRGMv2_0758_25_6 8773 10671 - GH163
NULL(UNKNOWN) HRGMv2_0758_25 HRGMv2_0758_25_7 10672 12474 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0758_25 HRGMv2_0758_25_8 12477 13337 - 3.A.1.1.41
pfam HRGMv2_0758_25 HRGMv2_0758_25_9 13349 14410 - BPD_transp_1
NULL(UNKNOWN) HRGMv2_0758_25 HRGMv2_0758_25_10 14470 16170 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0758_25 HRGMv2_0758_25_11 16217 17449 - GH177
Gene ID: HRGMv2_0758_25_4
Type: CAZyme
Location: 4442 - 6721 (-)
Gene ID: HRGMv2_0758_25_5
Type: CAZyme
Location: 6734 - 8773 (-)
Gene ID: HRGMv2_0758_25_6
Type: CAZyme
Location: 8773 - 10671 (-)
Gene ID: HRGMv2_0758_25_7
Type:
Location: 10672 - 12474 (-)
Gene ID: HRGMv2_0758_25_8
Type: TC
Location: 12477 - 13337 (-)
Gene ID: HRGMv2_0758_25_9
Type: pfam
Location: 13349 - 14410 (-)
Gene ID: HRGMv2_0758_25_10
Type:
Location: 14470 - 16170 (-)
Gene ID: HRGMv2_0758_25_11
Type: CAZyme
Location: 16217 - 17449 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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