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Cluster: HRGMv2_0758_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0758_11 HRGMv2_0758_11_20 23530 25338 - GH13_39
CAZyme HRGMv2_0758_11 HRGMv2_0758_11_21 25342 27777 - GT35
CAZyme HRGMv2_0758_11 HRGMv2_0758_11_22 27831 29555 - GT5
pfam HRGMv2_0758_11 HRGMv2_0758_11_23 29574 30686 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_0758_11 HRGMv2_0758_11_24 30700 31896 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_0758_11 HRGMv2_0758_11_25 31921 33786 - CBM48 | GH13_9
pfam HRGMv2_0758_11 HRGMv2_0758_11_26 33946 35382 - PGI
pfam HRGMv2_0758_11 HRGMv2_0758_11_27 35398 36189 - AP_endonuc_2
TC HRGMv2_0758_11 HRGMv2_0758_11_28 36189 38615 - 3.A.9.1.2
Gene ID: HRGMv2_0758_11_20
Type: CAZyme
Location: 23530 - 25338 (-)
Gene ID: HRGMv2_0758_11_21
Type: CAZyme
Location: 25342 - 27777 (-)
Gene ID: HRGMv2_0758_11_22
Type: CAZyme
Location: 27831 - 29555 (-)
Gene ID: HRGMv2_0758_11_23
Type: pfam
Location: 29574 - 30686 (-)
Gene ID: HRGMv2_0758_11_24
Type: pfam
Location: 30700 - 31896 (-)
Gene ID: HRGMv2_0758_11_25
Type: CAZyme
Location: 31921 - 33786 (-)
Gene ID: HRGMv2_0758_11_26
Type: pfam
Location: 33946 - 35382 (-)
Gene ID: HRGMv2_0758_11_27
Type: pfam
Location: 35398 - 36189 (-)
Gene ID: HRGMv2_0758_11_28
Type: TC
Location: 36189 - 38615 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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