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Cluster: HRGMv2_0758_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0758_6 HRGMv2_0758_6_34 30768 31754 + 3.A.1.1.25
NULL(UNKNOWN) HRGMv2_0758_6 HRGMv2_0758_6_35 31755 34841 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0758_6 HRGMv2_0758_6_36 34853 36910 + GH163
pfam HRGMv2_0758_6 HRGMv2_0758_6_37 36913 38946 + Big_2 | Big-like
pfam HRGMv2_0758_6 HRGMv2_0758_6_38 38987 41707 + Flg_new | Flg_new
CAZyme HRGMv2_0758_6 HRGMv2_0758_6_39 41788 44019 + GH2
CAZyme HRGMv2_0758_6 HRGMv2_0758_6_40 44012 46483 + GH2
pfam HRGMv2_0758_6 HRGMv2_0758_6_41 46487 47353 + Hydrolase | HAD_2
NULL(UNKNOWN) HRGMv2_0758_6 HRGMv2_0758_6_42 47353 47490 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0758_6 HRGMv2_0758_6_43 47674 48888 + GH37
Gene ID: HRGMv2_0758_6_34
Type: TC
Location: 30768 - 31754 (+)
Gene ID: HRGMv2_0758_6_35
Type:
Location: 31755 - 34841 (+)
Gene ID: HRGMv2_0758_6_36
Type: CAZyme
Location: 34853 - 36910 (+)
Gene ID: HRGMv2_0758_6_37
Type: pfam
Location: 36913 - 38946 (+)
Gene ID: HRGMv2_0758_6_38
Type: pfam
Location: 38987 - 41707 (+)
Gene ID: HRGMv2_0758_6_39
Type: CAZyme
Location: 41788 - 44019 (+)
Gene ID: HRGMv2_0758_6_40
Type: CAZyme
Location: 44012 - 46483 (+)
Gene ID: HRGMv2_0758_6_41
Type: pfam
Location: 46487 - 47353 (+)
Gene ID: HRGMv2_0758_6_42
Type:
Location: 47353 - 47490 (+)
Gene ID: HRGMv2_0758_6_43
Type: CAZyme
Location: 47674 - 48888 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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