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Cluster: HRGMv2_0758_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0758_3 HRGMv2_0758_3_21 24358 26946 - 3.A.3.23.2
peptidase HRGMv2_0758_3 HRGMv2_0758_3_22 27090 28322 + M29.UPW
NULL(UNKNOWN) HRGMv2_0758_3 HRGMv2_0758_3_23 28322 30013 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0758_3 HRGMv2_0758_3_24 30019 30861 - 3.A.1.3.25
TC HRGMv2_0758_3 HRGMv2_0758_3_25 30858 31601 - 3.A.1.3.15
TC HRGMv2_0758_3 HRGMv2_0758_3_26 31671 32495 - 3.A.1.3.17
pfam HRGMv2_0758_3 HRGMv2_0758_3_27 32637 33443 - adh_short | KR | adh_short_C2
CAZyme HRGMv2_0758_3 HRGMv2_0758_3_28 33514 34236 + CE4
Gene ID: HRGMv2_0758_3_21
Type: TC
Location: 24358 - 26946 (-)
Gene ID: HRGMv2_0758_3_22
Type: peptidase
Location: 27090 - 28322 (+)
Gene ID: HRGMv2_0758_3_23
Type:
Location: 28322 - 30013 (+)
Gene ID: HRGMv2_0758_3_24
Type: TC
Location: 30019 - 30861 (-)
Gene ID: HRGMv2_0758_3_25
Type: TC
Location: 30858 - 31601 (-)
Gene ID: HRGMv2_0758_3_26
Type: TC
Location: 31671 - 32495 (-)
Gene ID: HRGMv2_0758_3_27
Type: pfam
Location: 32637 - 33443 (-)
Gene ID: HRGMv2_0758_3_28
Type: CAZyme
Location: 33514 - 34236 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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