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Cluster: HRGMv2_0757_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0757_9 HRGMv2_0757_9_11 14259 16193 - GH163
NULL(UNKNOWN) HRGMv2_0757_9 HRGMv2_0757_9_12 16213 20412 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0757_9 HRGMv2_0757_9_13 20409 21281 - 3.A.1.1.18
pfam HRGMv2_0757_9 HRGMv2_0757_9_14 21285 22214 - BPD_transp_1
NULL(UNKNOWN) HRGMv2_0757_9 HRGMv2_0757_9_15 22231 23970 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0757_9 HRGMv2_0757_9_16 24065 25069 - GH130_5
CAZyme HRGMv2_0757_9 HRGMv2_0757_9_17 25295 29401 - GH163
Gene ID: HRGMv2_0757_9_11
Type: CAZyme
Location: 14259 - 16193 (-)
Gene ID: HRGMv2_0757_9_12
Type:
Location: 16213 - 20412 (-)
Gene ID: HRGMv2_0757_9_13
Type: TC
Location: 20409 - 21281 (-)
Gene ID: HRGMv2_0757_9_14
Type: pfam
Location: 21285 - 22214 (-)
Gene ID: HRGMv2_0757_9_15
Type:
Location: 22231 - 23970 (-)
Gene ID: HRGMv2_0757_9_16
Type: CAZyme
Location: 24065 - 25069 (-)
Gene ID: HRGMv2_0757_9_17
Type: CAZyme
Location: 25295 - 29401 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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