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Cluster: HRGMv2_0757_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0757_7 HRGMv2_0757_7_12 19212 20444 + GH177
NULL(UNKNOWN) HRGMv2_0757_7 HRGMv2_0757_7_13 20493 22193 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0757_7 HRGMv2_0757_7_14 22253 23314 + BPD_transp_1
TC HRGMv2_0757_7 HRGMv2_0757_7_15 23326 24186 + 3.A.1.1.41
NULL(UNKNOWN) HRGMv2_0757_7 HRGMv2_0757_7_16 24189 25991 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0757_7 HRGMv2_0757_7_17 25992 27890 + GH163
CAZyme HRGMv2_0757_7 HRGMv2_0757_7_18 27890 29929 + GH36
CAZyme HRGMv2_0757_7 HRGMv2_0757_7_19 29942 32221 + GH94
pfam HRGMv2_0757_7 HRGMv2_0757_7_20 32237 33934 + GDPD
CAZyme HRGMv2_0757_7 HRGMv2_0757_7_21 33947 35209 + GH109
Gene ID: HRGMv2_0757_7_12
Type: CAZyme
Location: 19212 - 20444 (+)
Gene ID: HRGMv2_0757_7_13
Type:
Location: 20493 - 22193 (+)
Gene ID: HRGMv2_0757_7_14
Type: pfam
Location: 22253 - 23314 (+)
Gene ID: HRGMv2_0757_7_15
Type: TC
Location: 23326 - 24186 (+)
Gene ID: HRGMv2_0757_7_16
Type:
Location: 24189 - 25991 (+)
Gene ID: HRGMv2_0757_7_17
Type: CAZyme
Location: 25992 - 27890 (+)
Gene ID: HRGMv2_0757_7_18
Type: CAZyme
Location: 27890 - 29929 (+)
Gene ID: HRGMv2_0757_7_19
Type: CAZyme
Location: 29942 - 32221 (+)
Gene ID: HRGMv2_0757_7_20
Type: pfam
Location: 32237 - 33934 (+)
Gene ID: HRGMv2_0757_7_21
Type: CAZyme
Location: 33947 - 35209 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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