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Cluster: HRGMv2_0757_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0757_2 HRGMv2_0757_2_49 50215 50937 - CE4
pfam HRGMv2_0757_2 HRGMv2_0757_2_50 51008 51814 + adh_short | KR | adh_short_C2
STP HRGMv2_0757_2 HRGMv2_0757_2_51 51956 52810 + SBP_bac_3
TC HRGMv2_0757_2 HRGMv2_0757_2_52 52880 53638 + 3.A.1.3.15
TC HRGMv2_0757_2 HRGMv2_0757_2_53 53645 54484 + 3.A.1.3.25
NULL(UNKNOWN) HRGMv2_0757_2 HRGMv2_0757_2_54 54490 56190 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0757_2 HRGMv2_0757_2_55 56190 57422 - M29.UPW
TC HRGMv2_0757_2 HRGMv2_0757_2_56 57566 60151 + 3.A.3.23.2
Gene ID: HRGMv2_0757_2_49
Type: CAZyme
Location: 50215 - 50937 (-)
Gene ID: HRGMv2_0757_2_50
Type: pfam
Location: 51008 - 51814 (+)
Gene ID: HRGMv2_0757_2_51
Type: STP
Location: 51956 - 52810 (+)
Gene ID: HRGMv2_0757_2_52
Type: TC
Location: 52880 - 53638 (+)
Gene ID: HRGMv2_0757_2_53
Type: TC
Location: 53645 - 54484 (+)
Gene ID: HRGMv2_0757_2_54
Type:
Location: 54490 - 56190 (-)
Gene ID: HRGMv2_0757_2_55
Type: peptidase
Location: 56190 - 57422 (-)
Gene ID: HRGMv2_0757_2_56
Type: TC
Location: 57566 - 60151 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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