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Cluster: HRGMv2_0757_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0757_16 HRGMv2_0757_16_22 20583 21761 + GT4
CAZyme HRGMv2_0757_16 HRGMv2_0757_16_23 21758 22942 + GT4
CAZyme HRGMv2_0757_16 HRGMv2_0757_16_24 22997 24202 + GT4
NULL(UNKNOWN) HRGMv2_0757_16 HRGMv2_0757_16_25 24199 25551 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0757_16 HRGMv2_0757_16_26 25548 26750 + GT4
pfam HRGMv2_0757_16 HRGMv2_0757_16_27 26747 27856 + PS_pyruv_trans
STP HRGMv2_0757_16 HRGMv2_0757_16_28 27861 29033 + Fer4 | Fer4
TC HRGMv2_0757_16 HRGMv2_0757_16_29 29030 30544 + 2.A.66.1.40
TC HRGMv2_0757_16 HRGMv2_0757_16_30 30541 31587 + 9.B.18.2.1
Gene ID: HRGMv2_0757_16_22
Type: CAZyme
Location: 20583 - 21761 (+)
Gene ID: HRGMv2_0757_16_23
Type: CAZyme
Location: 21758 - 22942 (+)
Gene ID: HRGMv2_0757_16_24
Type: CAZyme
Location: 22997 - 24202 (+)
Gene ID: HRGMv2_0757_16_25
Type:
Location: 24199 - 25551 (+)
Gene ID: HRGMv2_0757_16_26
Type: CAZyme
Location: 25548 - 26750 (+)
Gene ID: HRGMv2_0757_16_27
Type: pfam
Location: 26747 - 27856 (+)
Gene ID: HRGMv2_0757_16_28
Type: STP
Location: 27861 - 29033 (+)
Gene ID: HRGMv2_0757_16_29
Type: TC
Location: 29030 - 30544 (+)
Gene ID: HRGMv2_0757_16_30
Type: TC
Location: 30541 - 31587 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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