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Cluster: HRGMv2_0756_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0756_2 HRGMv2_0756_2_117 143125 143964 - 3.A.1.1.27
TC HRGMv2_0756_2 HRGMv2_0756_2_118 143961 145310 - 3.A.1.1.27
STP HRGMv2_0756_2 HRGMv2_0756_2_119 145325 146734 - SBP_bac_1
CAZyme HRGMv2_0756_2 HRGMv2_0756_2_120 146731 148419 - CBM34 | GH13_20
TF HRGMv2_0756_2 HRGMv2_0756_2_121 148479 149282 + LacI
pfam HRGMv2_0756_2 HRGMv2_0756_2_122 149367 151097 - Flg_new
TC HRGMv2_0756_2 HRGMv2_0756_2_123 151533 152333 + 1.A.16.1.1
TC HRGMv2_0756_2 HRGMv2_0756_2_124 152683 153474 + 3.A.1.3.12
TC HRGMv2_0756_2 HRGMv2_0756_2_125 153494 154177 + 3.A.1.3.15
TC HRGMv2_0756_2 HRGMv2_0756_2_126 154164 154982 + 3.A.1.3.15
Gene ID: HRGMv2_0756_2_117
Type: TC
Location: 143125 - 143964 (-)
Gene ID: HRGMv2_0756_2_118
Type: TC
Location: 143961 - 145310 (-)
Gene ID: HRGMv2_0756_2_119
Type: STP
Location: 145325 - 146734 (-)
Gene ID: HRGMv2_0756_2_120
Type: CAZyme
Location: 146731 - 148419 (-)
Gene ID: HRGMv2_0756_2_121
Type: TF
Location: 148479 - 149282 (+)
Gene ID: HRGMv2_0756_2_122
Type: pfam
Location: 149367 - 151097 (-)
Gene ID: HRGMv2_0756_2_123
Type: TC
Location: 151533 - 152333 (+)
Gene ID: HRGMv2_0756_2_124
Type: TC
Location: 152683 - 153474 (+)
Gene ID: HRGMv2_0756_2_125
Type: TC
Location: 153494 - 154177 (+)
Gene ID: HRGMv2_0756_2_126
Type: TC
Location: 154164 - 154982 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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