Cluster: HRGMv2_0756_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0756
- CGC Family ID: CGCFAM_07368
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0756_1 | HRGMv2_0756_1_39 | 53836 | 55122 | - | GH1 |
| STP | HRGMv2_0756_1 | HRGMv2_0756_1_40 | 55608 | 56843 | + | Aminotran_1_2 |
| pfam | HRGMv2_0756_1 | HRGMv2_0756_1_41 | 57049 | 58290 | - | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 |
| TC | HRGMv2_0756_1 | HRGMv2_0756_1_42 | 58381 | 59670 | - | 2.A.1.24.4 |
Gene ID: HRGMv2_0756_1_39
Type: CAZyme
Location: 53836 - 55122 (-)
Type: CAZyme
Location: 53836 - 55122 (-)
Gene ID: HRGMv2_0756_1_40
Type: STP
Location: 55608 - 56843 (+)
Type: STP
Location: 55608 - 56843 (+)
Gene ID: HRGMv2_0756_1_41
Type: pfam
Location: 57049 - 58290 (-)
Type: pfam
Location: 57049 - 58290 (-)
Gene ID: HRGMv2_0756_1_42
Type: TC
Location: 58381 - 59670 (-)
Type: TC
Location: 58381 - 59670 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
Limihabitans
Species
Limihabitans sp900554285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.